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Institution	Date	Title	Author
國立臺灣海洋大學	2019-08	Automatic Generation of Puzzle Tile Maps for Spatial-temporal Data Visualization	Shih-Syun Lin;Juo-Yu Yang;Huang-Sin Syu;Chao-Hung Lin;Tun-Wen Pai
國立臺灣海洋大學	2018-08	Multiple model species selection for transcriptomics analysis of non-model organisms	Tun-Wen Pai; Kuan-Hung Li; Cing-Han Yang; Chin-Hwa Hu; Han-Jia Lin; Wen-Der Wang; Yet-Ran Chen
國立臺灣海洋大學	2018-04	RNA-Seq-mediated transcriptomic analysis of heat stress response in a polar Chlorella sp. (Trebouxiophyceae, Chlorophyta	Sze-Wan Poong; Kok-Keong Lee; Phaik-Eem Lim; Tun-Wen Pai; Chiew-Yen Wong; Siew-Moi Phang; Chien-Ming Chen; Cing-Han Yang; Chun-Cheng Liu
國立臺灣海洋大學	2018-04	RNA-Seq-mediated transcriptomic analysis of heat stress response in a polar Chlorella sp. (Trebouxiophyceae, Chlorophyta)	Sze-Wan Poong; Kok-Keong Lee; Phaik-Eem Lim; Tun-Wen Pai; Chiew-Yen Wong; Chien-Ming Chen; Cing-Han Yang; Chun-Cheng Liu
國立臺灣海洋大學	2018-03	Functional Enrichment Analysis based on Long Noncoding RNA Associations	Kuo-Sheng Hung; Chung-Chi Hsiao; Tun-Wen Pai; Chin-Hwa Hu; Wen-Shyong Tzou; Wen-Der Wang; Yet-Ren Chen
國立臺灣海洋大學	2018-03	Transcriptome sequencing of an Antarctic microalga, Chlorella sp. (Trebouxiophyceae, Chlorophyta) subjected to short term ultraviolet radiation stress	Sze-Wan Poong; Chun-Cheng Liu; Phaik-Eem Lim; Siew-Moi Phang; Chiew-Yen Wong; Tun-Wen Pai; Chien-Ming Chen; Cing-Han Yang
國立臺灣海洋大學	2017-10	Comparison of grouper infection with two different iridoviruses using transcriptome sequencing and multiple reference species selection	Chun-Cheng Liu; Li-Ping Ho; Cin-Hang Yang; Tsung-Yu Kao; Hsin-Yiu Chou; Tun-Wen Pai
國立臺灣海洋大學	2017-03	Clinical Feature Classification for Chronic Heart Failure and Construction of a Safe Mechanism for Rehabilitation using Internet-of-Medical-Thing Devices	Shao-Jie Hsu; Shih-Syun Lin; Tun-Wen Pai; Chao-Hung Wang; Min-Hui Liu; Chi-Wen Cheng; Dong-Yi Chen; Kuo-Li Pan; Shyh-Ming Chen
國立臺灣海洋大學	2017-01	Complete chloroplast genome of Gracilaria firma (Gracilariaceae, Rhodophyta), with discussion on the use of chloroplast phylogenomics in the subclass Rhodymeniophycidae	Poh-Kheng Ng; Showe-Mei Lin; Phaik-Eem Lim; Li-Chia Liu; Chien-Ming Chen; Tun-Wen Pai
國立臺灣海洋大學	2017	Indoor localization and navigation using smartphone sensory data	Hui-Huang Hsu; Jung-Kuei Chang; Wei-Jan Peng; Timothy K. Shih; Tun-Wen Pai; Ka Lok Man
國立臺灣海洋大學	2017	Complete chloroplast genome of Gracilaria firma (Gracilariaceae, Rhodophyta): an update on the use of chloroplast phylogenomics to resolve the Florideophyceae	Poh-Kheng Ng; Showe-Mei Lin; Phaik-Eem Lim; Li-Chia Liu; Chien-Ming Chen; Tun-Wen Pai
國立臺灣海洋大學	2017	Autonomous Exercise Rehabilitation for Heart Failure Patients based on Six-Minute Walk Test through Internet-of-Thing Devices	Shao-Jie Hsu;Shih-Syun Lin;Tun-Wen Pai;Chao-Hung Wang;Min-Hui Liu;Chi-Hsin Lee
國立臺灣海洋大學	2017	Autonomous Exercise Rehabilitation for Heart Failure Patients based on Six-Minute Walk Test through Internet-of-Thing Devices	Shao-Jie Hsu;Shih-Syun Lin;Tun-Wen Pai;Chao-Hung Wang;Min-Hui Liu;Chi-Hsin Lee
國立臺灣海洋大學	2016-12	Application of PrefixSpan Algorithms for Disease Pattern Analysis	Chi-Jane Chen; Tun-Wen Pai; Shih-Syun Lin; Chun-Chao Yeh; Min-Hui Liu; Chao-Hung Wang
國立臺灣海洋大學	2016-12	Linear epitope prediction for grouper iridovirus antigens	Tao-Chuan Shih; Tun-Wen Pai; Li-Ping Ho; Hsin-Yiu Chou
國立臺灣海洋大學	2016-10	Proactive Healthcare and an Early Warning Mechanism for Coronary Artery Disease Patients using Internet-of-Thing Devices	Shao-Jie Hsu; Shih-Syun Lin; Tun-Wen Pai; Hamido Fujita
國立臺灣海洋大學	2016-10	Feature Analysis on Heart Failure Classes and Associated Medications	Chi-Jim Chen; Ying-Tsang Lo; Jhen-Li Huang; Tun-Wen Pai; Min-Hui Liu; Chao-Hung Wang
國立臺灣海洋大學	2016-08	A conformational epitope prediction system based on sequence and structural characteristics	Wan-Li Chang; Ying-Tsang Lo; Tun-Wen Pai
國立臺灣海洋大學	2016-07	Gene Ontology Based Clustering Analysis for Functionally Linked Genes and Cross-species Comparison for SSR biomarkers	Yang-Chun Chang; Chien-Ming Chen; Tun-Wen Pai; Ronshan Cheng; Ming-Hsiung Chiu
國立臺灣海洋大學	2016-07	Biological Pathway Analysis for de novo Transcriptomes through Multiple Reference Species Selections	Chun-Cheng Liu; Chien-Ming Chen; Cin-Han Yang; Tun-Wen Pai; Phaik-Eem Lim; Siew-Moi Phang; Sze-Wan Poong; Kok-Keong Lee
國立臺灣海洋大學	2016-06	A genome-wide association study on amyotrophic lateral sclerosis in the Taiwanese Han population	Chi-Jim Chen; Chien-Ming Chen; Tun-Wen Pai; Hao-Teng Chang; Chi-Shin Hwang
國立臺灣海洋大學	2016-05	SSRs as genetic markers in the human genome and their observable relationship to hereditary diseases	Tun-Wen Pai; Chien-Ming Chen
國立臺灣海洋大學	2016-04	Hypoxia-inducible factor 2-alpha participates in the regulation of intersegmental vessels angiogenesis and neuromast deposition	Chi-Fu Chou; Han-Jia Lin; Chih-Yu Tsai; Tzung-Yi Lin; Hsin-Yu Chung; Chia-Yin Chiang; Chung-Hao Li; Tun-Wen Pai; Chin-Hwa Hu; Wen-Shyong Tzou
國立臺灣海洋大學	2016-02	Prediction of coronary artery disease based on ensemble learning approaches and co-expressed observations	Ying-Tsang Lo; Hamido Fujita; Tun-Wen Pai
國立臺灣海洋大學	2016-02	Directed acyclic graph-based patient education system for cardiovascular patients in Taiwan	Jhen-Li Huang; Chien-Ming Chen; Tun-Wen Pai; Min-Hui Liu; Chao-Hung Wang
國立臺灣海洋大學	2015-07	Exclusive Genomic Pathway Analysis for Groupers Infected by Different Iridovirus	Chun-Cheng Liu; Chien-Ming Chen; Tun-Wen Pai; Hsin-Yiu Chou; Hui-Huang Hsu
國立臺灣海洋大學	2015-03	Intelligent Informatics in Translational Medicine	Hao-Teng Chang; Tatsuya Akutsu; Sorin Draghici; Oliver Ray; Tun-Wen Pai
國立臺灣海洋大學	2015	A Support Vector Machine Approach for Truncated Fingerprint Image Detection from Sweeping Fingerprint Sensors	Chi-Jim Chen; Tun-Wen Pai; Mox Cheng
國立臺灣海洋大學	2015	Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts	Chao-Li Huang;Pei-Hua Pu;Hao-Jen Huang;Huang-Mo Sung†, Hung-Jiun Liaw†, Yi-Min Chen;Chien-Ming Chen;Ming-Ban Huang;Naoki Osada;Takashi Gojobori;Tun-Wen Pai;Yu-Tin Chen;Chi-Chuan Hwang;Tzen-Yuh Chiang
國立臺灣海洋大學	2014-12-12	Identification of conserved and polymorphic STRs for personal genomes	Chien-Ming Chen;Chi-Pong Sio;Yu-Lun Lu;Hao-Teng Chang;Chin-Hwa Hu;Tun-Wen Pai
國立臺灣海洋大學	2014-09	Smartphone Indoor Localization with Accelerometer and Gyroscope	Hui-Huang Hsu; Wei-Jan Peng; Timothy K. Shih; Tun-Wen Pai; Ka Lok Man
國立臺灣海洋大學	2014-08	Stage diagnosis for chronic kidney disease based on ultrasonography	Chi-Jim Chen; Tun-Wen Pai; Hamido Fujita; Chien-Hung Lee; Yang-Ting Chen; Kuo-Su Chen; Yung-Chih Chen
國立臺灣海洋大學	2014-07	Transcriptome Data Visualization in Pathways with Application to Zebrafish Embryo Datasets	Chien-Ming Chen; Kuan-Jung Lai; Tun-Wen Pai; Hao-Teng Chang
國立臺灣海洋大學	2014-07	Epitope and Paratope Region Analysis	Ying-Tsang Lo; Tun-Wen Pai; Hui-Huang Hsu; Huai-Kuang Tsai
國立臺灣海洋大學	2014-04	A local average distance descriptor for flexible protein structure comparison	Hsin-Wei Wang; Chia-Han Chu; Wen-Ching Wang; Tun-Wen Pai
國立臺灣海洋大學	2014-03	Identification of simple sequence repeat biomarkers through cross-species comparison in a tag cloud representation	Jhen-Li Huang; Hao-Teng Chang; Ronshan Cheng; Hui-Huang Hsu; Tun-Wen Pai
國立臺灣海洋大學	2014-01-28	Molecular Evolution of Multiple-Level Control of Heme Biosynthesis Pathway in Animal Kingdom	Wen-Shyong Tzou ; Ying Chu; Tzung-Yi Lin; Chin-Hwa Hu;Tun-Wen Pai; Hsin-Fu Liu; Han-Jia Lin; Ildeofonso Cases; Ana Rojas;Mayka Sanchez; Zong-Ye You; Ming-Wei Hsu
國立臺灣海洋大學	2014	Molecular evolution of multiple-level control of heme biosynthesis pathway in animal kingdom	Wen-Shyong Tzou;Ying Chu;Tzung-Yi Lin;Chin-Hwa Hu;Tun-Wen Pai;Hsin-Fu Liu;Han-Jia Lin;Ildeofonso Cases;Ana Rojas;Mayka Sanchez;Zong-Ye You;Ming-Wei Hsu
國立臺灣海洋大學	2014	Machine Learning-Based Methods for Prediction of Linear B-Cell Epitopes	Hsin-Wei Wang; Tun-Wen Pai
國立臺灣海洋大學	2014	Hypoxia-Inducible Factor 2 Alpha Is Essential for Hepatic Outgrowth and Functions via the Regulation of leg1 Transcription in the Zebrafish Embryo	Tzung-Yi Lin;Chi-Fu Chou;Hsin-Yu Chung;Chia-Yin Chiang;Chung-Hao Li;Jen-Leih Wu;Han-Jia Lin;Tun-Wen Pai;Chin-Hwa Hu;Wen-Shyong Tzou
國立臺灣海洋大學	2014	Cross-species identification of in silico microsatellite biomarkers for genetic disease	Hao-Teng Chang;Yu-Yang Lo;Jhen-Li Huang;Wei-Yong Lin;Tun-Wen Pai
國立臺灣海洋大學	2014	Stochastic Simulation of Notch Signaling Reveals Novel Factors That Mediate the Differentiation of Neural Stem Cells	Wen-Shyong Tzou; Ying-Tsang Lo; Tun-Wen Pai; Chin-Hwa Hu; Chung-Hao Li
國立臺灣海洋大學	2014	Gene Ontology Based Housekeeping Gene Selection for RNA-seq Normalization	Chien-Ming Chen;Yu-Lun Lu;Chi-Pong Sio;Guan-Chung Wu;Wen-Shyong Tzou;Tun-Wen Pai
國立臺灣海洋大學	2014	Personal Health Management on a Smartphone Platform	Hui-Huang Hsu; Neil Y. Yen; Tun-Wen Pai; Min-Ho Chang
國立臺灣海洋大學	2013-10	Gene expression rate comparison for multiple high-throughput datasets	Chien-Ming Chen; Tsan-Huang Shih; Tun-Wen Pai; Zhen-Long Liu; Margaret Dah-Tsyr Chang; Chin-Hwa Hu
國立臺灣海洋大學	2013-07	Discovering feedback and coupled feedback loops in KEGG pathways through cross-map identification	Chen-Lung Liu; Chien-Ming Chen; Hui-Huang Hsu; Tun-Wen Pai
國立臺灣海洋大學	2013-07	Mining polymorphic SSRs from individual genome sequences	Chi-Pong Sio; Yu-Lun Lu; Chien-Ming Chen; Tun-Wen Pai; Hao-Teng Chang
國立臺灣海洋大學	2013-03	Prediction of Conformational Epitopes by Knowledge-based Energy Function and Geometrical Neighbouring Residue Contents	Ying-Tsang Lo; Tun-Wen Pai; Wei-Kuo Wu; Hao-Teng Chang
國立臺灣海洋大學	2013	Homologous synteny block detection based on suffix tree algorithm	Yu-Lun Chen;Chien-Ming Chen;Tun-Wen Pai;
國立臺灣海洋大學	2013	Protein-ligand Binding Region Prediction (PLB-SAVE) based on Geometric Features and GPU Acceleration	Ying-Tsang Lo;Hsin-Wei Wang;Tun-Wen Pai;Wen-Shoung Tzou;Hui-Huang Hsu;Hao-Teng Chang

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