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机构	日期	题名	作者
元智大學	Jun-23	Disto-TRP: An approach for identifying transient receptor potential (TRP) channels using structural information generated by AlphaFold	Syed Muazzam Ali Shah; Ou Y.-Y.
元智大學	Jun-19	iMotor-CNN: Identifying molecular functions of cytoskeleton motor proteins using 2D convolutional neural network via Chou''''s 5-step rule	Nguyen Quoc Khanh Le; Edward Kien Yee Yapp; Ou Y.-Y.; Hui-Yuan Yeh
元智大學	Jun-19	DeepIon: Deep learning approach for classifying ion transporters and ion channels from membrane proteins	Semmy Wellem Taju; Ou Y.-Y.
元智大學	Jun-17	Incorporating deep learning with convolutional neural networks and position specific scoring matrices for identifying electron transport proteins	Nguyen-Quoc-Khanh Le; Quang-Thai Ho; Ou Y.-Y.
元智大學	Jun-17	Incorporating deep learning with convolutional neural networks and position specific scoring matrices for identifying electron transport proteins	Nguyen-Quoc-Khanh Le; Quang-Thai Ho; Ou Y.-Y.
元智大學	Jul-22	Using multiple convolutional window scanning of convolutional neural network for an efficient prediction of ATP‐binding sites in transport proteins	Trinh‐Trung‐Duong Nguyen; Syun Chen; Quang‐Thai Ho; Ou Y.-Y.
元智大學	Jul-19	Using word embedding technique to efficiently represent protein sequences for identifying substrate specificities of transporters	Trinh-Trung-Duong Nguyen; Nguyen-Quoc-Khanh Le; Quang-Thai Ho; Dinh-Van Phan; Ou Y.-Y.
元智大學	Jan-22	mCNN-ETC: identifying electron transporters and their functional families by using multiple windows scanning techniques in convolutional neural networks with evolutionary information of protein sequences	Quang-Thai Ho; Nguyen Quoc Khanh Le; Ou Y.-Y.
元智大學	Jan-22	An Extensive Examination of Discovering 5-Methylcytosine Sites in Genome-Wide DNA Promoters Using Machine Learning Based Approaches	Trinh Trung Duong Nguyen; The-Anh Tran; Le Nguyen Quoc Khanh; Dinh-Minh Pham; Ou Y.-Y.
元智大學	Jan-22	mCNN-ETC: identifying electron transporters and their functional families by using multiple windows scanning techniques in convolutional neural networks with evolutionary information of protein sequences	胡光泰; Ou Y.-Y.; Nguyen Quoc Khanh Le
元智大學	Feb-24	Anti-Drugs Chatbot: Chinese BERT-Based Cognitive Intent Analysis	Jui-Hsuan Lee; Eric Hsiao-Kuang Wu; Ou Y.-Y.; Yueh-Che Lee; Cheng-Hsun Lee; Chia-Ru Chung
元智大學	Feb-19	Using two-dimensional convolutional neural networks for identifying GTP binding sites in Rab proteins	Nguyen Quoc Khanh Le; Quang-Thai Ho; Ou Y.-Y.
元智大學	Dec-23	Recent advances in features generation for membrane protein sequences: From multiple sequence alignment to pre‐trained language models	Ou Y.-Y.; Heng-Ta Chang; 胡光泰(HO QUANG THAI)
元智大學	Dec-23	Integrating Pre-Trained protein language model and multiple window scanning deep learning networks for accurate identification of secondary active transporters in membrane proteins	Muhammad Shahid Malik; Ou Y.-Y.
元智大學	Dec-21	Using k-mer embeddings learned from a Skip-gram based neural network for building a cross-species DNA N6-methyladenine site prediction model	Trinh Trung Duong Nguyen; Van Ngu Trinh; Nguyen Quoc Khanh Le; Ou Y.-Y.
元智大學	Dec-18	Incorporating post translational modification information for enhancing the predictive performance of membrane transport proteins	Nguyen Quoc Khanh Le; Green Arther Sandag; Ou Y.-Y.
元智大學	Dec-16	Incorporating efficient radial basis function networks and significant amino acid pairs for predicting GTP binding sites in transport proteins	Nguyen-Quoc-Khanh Le; Ou Y.-Y.
元智大學	Aug-21	DeepSIRT: A deep neural network for identification of sirtuin targets and their subcellular localizations	Syed Muazzam Ali Shah; Semmy Wellem Taju; Bongani Brian Dlamini; Ou Y.-Y.
元智大學	Aug-21	ActTRANS: Functional classification in active transport proteins based on transfer learning and contextual representations	Semmy Wellem Taju; Syed Muazzam Ali Shah; Ou Y.-Y.
元智大學	Aug-18	Classifying the molecular functions of Rab GTPases in membrane trafficking using deep convolutional neural networks	Nguyen-Quoc-Khanh Le; Quang-Thai Ho; Ou Y.-Y.
元智大學	Aug-16	Prediction of FAD binding sites in electron transport proteins according to efficient radial basis function networks and significant amino acid pairs	Nguyen-Quoc-Khanh Le; Ou Y.-Y.
元智大學	Apr-21	GT-Finder: Classify the family of glucose transporters with pre-trained BERT language models	Syed Muazzam Ali Shah; Semmy Wellem Taju; Quang-Thai Ho; Trinh-Trung-Duong Nguyen; Ou Y.-Y.
元智大學	Apr-21	FAD-BERT: Improved Prediction of FAD Binding Sites Using Pre-training of Deep Bidirectional Transformers	Quang-Thai Ho; Nguyen Quoc Khanh Le; Trinh-Trung-Duong Nguyen; Ou Y.-Y.
元智大學	Apr-19	Enhancer-5Step: Identifying enhancers using hidden information of DNA sequences via Chou''s 5-step rule and word embedding	Nguyen Quoc Khanh Le; Edward Kien YeeYapp; Quang-Thai Ho; N.Nagasundaram; Ou Y.-Y.; Hui-Yuan Yeh
國立成功大學	2022	Application of Named Entity Recognition by Self-Attention BiLSTM-CRF to Chinese Prescription Document	Tsai, A.-C.;Lee, T.-Y.;Ou, Y.-Y.;Wang, J.-F.

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